Explain your data by Concept Profile Analysis Web Services

Hettne KM, van Schouwen R, Mina E, van der Horst E, Thompson M, Kaliyaperuma R, Mons B, van Mulligen E, Kors JA, Roos M


F1000 Research 3:173, July 2014
DOI: 10.12688/f1000research.4830.1

Abstract

The Concept Profile Analysis technology (overlapping co-occurring concept sets based on knowledge contained in biomedical abstracts) has led to new biomedical discoveries, and users have been able to interact with concept profiles through the interactive tool “Anni” (http://biosemantics.org/anni). However, Anni provides no way for users to save their procedures, results, or related provenance. Here we present a new suite of Web Service operations that allows bioinformaticians to design and execute their own Concept Profile Analysis workflow, possibly as part of a larger bioinformatics analysis. The source code can be downloaded from ZENODO at http://www.dx.doi.org/10.5281/zenodo.10963.

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